Japan Airlines
Su
Starting at $106
All Nippon Airways
Su
Starting at $110
Helping travelers to find the best flight offers
A direct flight is the most convenient and comfortable way to fly from Nagasaki to Tokyo, despite the fact that sometimes flights with transfers can cost significantly less.
A direct flight is the easiest way to get to your destination. The following airlines operate non-stop flights from Nagasaki to Tokyo:
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We keep tight track on airlines' pre-holidays sales and other special offers occurences all the time to let you save maximum amount of funds while traveling to your family or just going out on vacation.
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Japan Airlines
Su
Starting at $106
All Nippon Airways
Su
Starting at $110
The cheapest one-way flight from Nagasaki to Tokyo departs on 01/09/2026, is operated by Jetstar Japan and costs $63
The cheapest roundtrip flight from Nagasaki to Tokyo departs on 02/11/2026, is operated by Jetstar Japan and costs $147
Fastest flight from Nagasaki to Tokyo takes 1h 40m
There are direct flights on this route 2 days a week: Su and Fr
The distance between Nagasaki and Tokyo is 948km (588 miles). The average flight duration is 1h 32m. There are 22 direct flights from Nagasaki to Tokyo. Nagasaki and Tokyo are in the same time zone. Flights from Nagasaki begin at 7:45 AM. The latest flight from Nagasaki departs at 9:10 PM
Nagasaki — Tokyo
12/14/2025
Departure
Direct flight
GK642
Starting at $127
Nagasaki — Tokyo
01/09/2026
Departure
Direct flight
GK6102
Starting at $64
Nagasaki — Tokyo
08/21/2026
Departure
Direct flight
GK640
Starting at $105
Nagasaki — Tokyo
11/09/2026
Departure
Direct flight
JL616
Starting at $107
Starting at $63
Starting at $107
The route Nagasaki — Tokyo is served by several airlines: Jetstar Japan and Japan Airlines. This gives passengers more freedom in choosing flights. You can consider not only the price but also schedules, baggage policies, and onboard service. Our service compares all offers so you can find tickets from $63 and choose the most convenient option. Thanks to airline competition, you may also find promotional fares or special offers, helping you save even more. Plan your trip in advance and choose the best flights without overpaying.
We couldn't find any special offers for flights from Nagasaki to Tokyo
The cheapest flight ticket from Nagasaki to Tokyo according to data for the last 48 hours costs $63
Often the best time to buy tickets from Nagasaki to Tokyo is 2 months before departure.
Based on statistics over the past years, the lowest prices for flights from Nagasaki to Tokyo can be found flying in these months: January, August.
The fastest flights from Nagasaki to Tokyo start from 1 hour 40 minutes in the air.
The following airlines operate direct flights on the route Nagasaki — Tokyo: Jetstar Japan, Japan Airlines
The minimum one-way ticket price from Nagasaki to Tokyo is $63 (January 2026), while the maximum is $78 (August 2026). On average, a ticket costs $71–$78.